Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB34474.1 | ABB36359.1 | Syncc9605_0700 | Syncc9605_2634 | Putative dihydroorotase. | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.993 |
ABB34474.1 | carA | Syncc9605_0700 | Syncc9605_1152 | Putative dihydroorotase. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.956 |
ABB34474.1 | carB | Syncc9605_0700 | Syncc9605_1819 | Putative dihydroorotase. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.957 |
ABB34474.1 | pyrB | Syncc9605_0700 | Syncc9605_0292 | Putative dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.998 |
ABB34474.1 | pyrD | Syncc9605_0700 | Syncc9605_2465 | Putative dihydroorotase. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.995 |
ABB34474.1 | pyrE | Syncc9605_0700 | Syncc9605_0231 | Putative dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.946 |
ABB34474.1 | pyrF | Syncc9605_0700 | Syncc9605_2100 | Putative dihydroorotase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.957 |
ABB34688.1 | ABB36359.1 | Syncc9605_0926 | Syncc9605_2634 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | 0.845 |
ABB34688.1 | carA | Syncc9605_0926 | Syncc9605_1152 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.989 |
ABB34688.1 | carB | Syncc9605_0926 | Syncc9605_1819 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.990 |
ABB34688.1 | pyrB | Syncc9605_0926 | Syncc9605_0292 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.849 |
ABB36359.1 | ABB34474.1 | Syncc9605_2634 | Syncc9605_0700 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Putative dihydroorotase. | 0.993 |
ABB36359.1 | ABB34688.1 | Syncc9605_2634 | Syncc9605_0926 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.845 |
ABB36359.1 | carA | Syncc9605_2634 | Syncc9605_1152 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | 0.998 |
ABB36359.1 | carB | Syncc9605_2634 | Syncc9605_1819 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Carbamoyl-phosphate synthase, large subunit; Belongs to the CarB family. | 0.998 |
ABB36359.1 | pyrB | Syncc9605_2634 | Syncc9605_0292 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.913 |
ABB36359.1 | pyrD | Syncc9605_2634 | Syncc9605_2465 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.821 |
ABB36359.1 | pyrE | Syncc9605_2634 | Syncc9605_0231 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.777 |
ABB36359.1 | pyrF | Syncc9605_2634 | Syncc9605_2100 | Putative aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.777 |
carA | ABB34474.1 | Syncc9605_1152 | Syncc9605_0700 | Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family. | Putative dihydroorotase. | 0.956 |
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