Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABB34174.1 | ABB34356.1 | Syncc9605_0398 | Syncc9605_0582 | Anthranilate synthase. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.905 |
ABB34174.1 | ABB36178.1 | Syncc9605_0398 | Syncc9605_2446 | Anthranilate synthase. | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | 0.999 |
ABB34174.1 | ABB36330.1 | Syncc9605_0398 | Syncc9605_2603 | Anthranilate synthase. | Anthranilate synthase. | 0.839 |
ABB34174.1 | ABB36385.1 | Syncc9605_0398 | Syncc9605_2660 | Anthranilate synthase. | Glutamine amidotransferase-phosphoribosyl anthranilate transferase. | 0.949 |
ABB34174.1 | aroC | Syncc9605_0398 | Syncc9605_0304 | Anthranilate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.938 |
ABB34174.1 | trpA | Syncc9605_0398 | Syncc9605_0990 | Anthranilate synthase. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.963 |
ABB34174.1 | trpB | Syncc9605_0398 | Syncc9605_2418 | Anthranilate synthase. | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.893 |
ABB34174.1 | trpC | Syncc9605_0398 | Syncc9605_0870 | Anthranilate synthase. | Indole-3-glycerol-phosphate synthase; Belongs to the TrpC family. | 0.998 |
ABB34174.1 | trpD | Syncc9605_0398 | Syncc9605_1151 | Anthranilate synthase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.998 |
ABB34174.1 | trpF | Syncc9605_0398 | Syncc9605_0733 | Anthranilate synthase. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.914 |
ABB34356.1 | ABB34174.1 | Syncc9605_0582 | Syncc9605_0398 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Anthranilate synthase. | 0.905 |
ABB34356.1 | ABB36178.1 | Syncc9605_0582 | Syncc9605_2446 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | 0.812 |
ABB34356.1 | ABB36330.1 | Syncc9605_0582 | Syncc9605_2603 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Anthranilate synthase. | 0.810 |
ABB34356.1 | aroC | Syncc9605_0582 | Syncc9605_0304 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.941 |
ABB36178.1 | ABB34174.1 | Syncc9605_2446 | Syncc9605_0398 | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | Anthranilate synthase. | 0.999 |
ABB36178.1 | ABB34356.1 | Syncc9605_2446 | Syncc9605_0582 | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.812 |
ABB36178.1 | ABB36330.1 | Syncc9605_2446 | Syncc9605_2603 | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | Anthranilate synthase. | 0.999 |
ABB36178.1 | ABB36385.1 | Syncc9605_2446 | Syncc9605_2660 | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | Glutamine amidotransferase-phosphoribosyl anthranilate transferase. | 0.842 |
ABB36178.1 | aroC | Syncc9605_2446 | Syncc9605_0304 | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.886 |
ABB36178.1 | trpA | Syncc9605_2446 | Syncc9605_0990 | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.957 |
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