STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515235_00252Unannotated protein. (581 aa)    
Predicted Functional Partners:
GCA_000515235_00251
Unannotated protein.
 
   
 0.969
GCA_000515235_00253
Unannotated protein.
 
     0.952
GCA_000515235_00254
Unannotated protein.
 
     0.952
GCA_000515235_00250
Unannotated protein.
 
   
 0.894
GCA_000515235_00261
Unannotated protein.
 
     0.795
GCA_000515235_00246
Unannotated protein.
 
   
 0.783
GCA_000515235_00249
Unannotated protein.
 
   
 0.759
GCA_000515235_02805
Unannotated protein.
  
     0.715
GCA_000515235_00248
Unannotated protein.
 
   
 0.624
GCA_000515235_00255
Unannotated protein.
 
   
 0.582
Your Current Organism:
Synechococcus sp. CC9616
NCBI taxonomy Id: 110663
Other names: S. sp. CC9616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.