STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515235_00268Unannotated protein. (93 aa)    
Predicted Functional Partners:
GCA_000515235_00269
Unannotated protein.
       0.746
GCA_000515235_00270
Unannotated protein.
       0.670
GCA_000515235_00267
Unannotated protein.
       0.628
GCA_000515235_00266
Unannotated protein.
       0.468
GCA_000515235_00263
Unannotated protein.
       0.432
GCA_000515235_00264
Unannotated protein.
       0.432
GCA_000515235_00265
Unannotated protein.
       0.432
Your Current Organism:
Synechococcus sp. CC9616
NCBI taxonomy Id: 110663
Other names: S. sp. CC9616
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