STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515235_00461Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000515235_02135
Unannotated protein.
    
 0.840
GCA_000515235_00297
Unannotated protein.
    
  0.627
GCA_000515235_00870
Unannotated protein.
    
  0.627
GCA_000515235_02122
Unannotated protein.
    
 
0.627
GCA_000515235_02123
Unannotated protein.
    
  0.627
GCA_000515235_02376
Unannotated protein.
    
  0.627
GCA_000515235_02519
Unannotated protein.
    
  0.627
GCA_000515235_00460
Unannotated protein.
      
0.476
GCA_000515235_02134
Unannotated protein.
   
 
 0.430
Your Current Organism:
Synechococcus sp. CC9616
NCBI taxonomy Id: 110663
Other names: S. sp. CC9616
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.