STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000515235_00859Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_000515235_00860
Unannotated protein.
       0.773
GCA_000515235_00206
Unannotated protein.
 
   
 0.757
GCA_000515235_00861
Unannotated protein.
     
 0.725
GCA_000515235_01216
Unannotated protein.
 
     0.706
GCA_000515235_00857
Unannotated protein.
 
     0.703
GCA_000515235_00858
Unannotated protein.
       0.663
GCA_000515235_00856
Unannotated protein.
       0.592
GCA_000515235_02527
Unannotated protein.
 
   
 0.586
GCA_000515235_00862
Unannotated protein.
       0.573
GCA_000515235_02521
Unannotated protein.
 
   
 0.523
Your Current Organism:
Synechococcus sp. CC9616
NCBI taxonomy Id: 110663
Other names: S. sp. CC9616
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.