STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAB89363.1Hypothetical protein. (177 aa)    
Predicted Functional Partners:
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
       0.861
folB
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.861
GAB89362.1
Hypothetical protein.
 
     0.853
folP
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.806
GAB92954.1
Hypothetical protein.
  
     0.730
folE
GTP cyclohydrolase I.
       0.718
GAB89459.1
Putative chorismate mutase.
  
     0.709
GAB90407.1
Hypothetical protein.
  
     0.704
GAB91966.1
Hypothetical protein.
  
     0.673
GAB90233.1
Hypothetical protein.
  
     0.661
Your Current Organism:
Gordonia rhizosphera
NCBI taxonomy Id: 1108045
Other names: G. rhizosphera NBRC 16068, Gordonia rhizosphera NBRC 16068, Gordonia rhizosphera str. NBRC 16068, Gordonia rhizosphera strain NBRC 16068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.