STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0B7F8U0Senescence domain-containing protein. (449 aa)    
Predicted Functional Partners:
BN14_04154
IST1 homolog Short.
    
 
 0.904
A0A0B7FC87
EH domain-containing and endocytosis protein 1.
    
 
 0.559
RSP5
E3 ubiquitin-protein ligase.
    
 
 0.494
A0A0B7FJP1
Uncharacterized protein.
    
 
 0.494
A0A0B7FMX3
LON domain serine protease, putative.
    
 
 0.494
A0A0B7FZQ7
TFIIIC_delta domain-containing protein.
    
 
 0.494
A0A0B7FMW6
Uncharacterized protein.
      
 0.493
Your Current Organism:
Rhizoctonia solani AG1IB
NCBI taxonomy Id: 1108050
Other names: R. solani AG-1 IB, Rhizoctonia solani AG 1-IB, Rhizoctonia solani AG-1 IB, Rhizoctonia solani AG-1-IB, Rhizoctonia solani AG1 IB, Rhizoctonia solani AG1-IB
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