STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ50506.1Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
AOZ50507.1
Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
AOZ50508.1
Histidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
AOZ50509.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 
 
 0.973
AOZ52752.1
Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.916
AOZ49629.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.908
AOZ49527.1
Cysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.836
AOZ51572.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.809
AOZ49628.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
  
 0.777
AOZ51925.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.759
AOZ49514.1
Cystine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.
 
  
 0.755
Your Current Organism:
Chromobacterium vaccinii
NCBI taxonomy Id: 1108595
Other names: ATCC BAA-2314, C. vaccinii, Chromobacterium sp. MWU205, Chromobacterium sp. MWU300, Chromobacterium sp. MWU328, Chromobacterium vaccinii Soby et al. 2013, DSM 25150, strain MWU205
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