STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOZ51973.1Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)    
Predicted Functional Partners:
AOZ52659.1
Enterochelin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.810
AOZ50971.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.787
AOZ51974.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AOZ51972.1
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.751
AOZ50787.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.749
AOZ50105.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.744
AOZ50831.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.739
AOZ49513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.736
AOZ50791.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 
 0.736
AOZ49378.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 
 0.700
Your Current Organism:
Chromobacterium vaccinii
NCBI taxonomy Id: 1108595
Other names: ATCC BAA-2314, C. vaccinii, Chromobacterium sp. MWU205, Chromobacterium sp. MWU300, Chromobacterium sp. MWU328, Chromobacterium vaccinii Soby et al. 2013, DSM 25150, strain MWU205
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.