STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORW06491.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
ORW06488.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.971
ORW06489.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.883
ORW06490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.883
ORW06492.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.879
ORW06493.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.805
ORW06487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.714
ORW09661.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.698
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
   
    0.621
ORW07385.1
Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.
   
    0.620
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.
   
    0.618
Your Current Organism:
Mycolicibacter longobardus
NCBI taxonomy Id: 1108812
Other names: CCUG 58460, DSM 45394, M. longobardus, Mycobacterium longobardum, Mycobacterium longobardum Tortoli et al. 2013, Mycobacterium sp. DSM 45393, Mycobacterium sp. DSM 45394, Mycolicibacter longobardus (Tortoli et al. 2013) Gupta et al. 2018, strain FI-07034
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