Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pc13g07290 | Pc13g12220 | B6H3S8 | B6H591 | Pc13g07290 protein. | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | 0.931 |
Pc13g07290 | Pc16g00980 | B6H3S8 | B6H6Z1 | Pc13g07290 protein. | Pc16g00980 protein. | 0.928 |
Pc13g07290 | Pc20g01860 | B6H3S8 | B6HE19 | Pc13g07290 protein. | Pc20g01860 protein; Belongs to the FPP/GGPP synthase family. | 0.931 |
Pc13g07290 | Pc20g07830 | B6H3S8 | B6HEL5 | Pc13g07290 protein. | Pc20g07830 protein; Belongs to the FPP/GGPP synthase family. | 0.936 |
Pc13g07290 | Pc21g13930 | B6H3S8 | B6HNR8 | Pc13g07290 protein. | Pc21g13930 protein. | 0.822 |
Pc13g07290 | Pc21g15240 | B6H3S8 | B6HJG5 | Pc13g07290 protein. | Pc21g15240 protein; Belongs to the FPP/GGPP synthase family. | 0.945 |
Pc13g07290 | Pc22g05810 | B6H3S8 | B6HV70 | Pc13g07290 protein. | Pc22g05810 protein. | 0.955 |
Pc13g07290 | Pc22g12410 | B6H3S8 | B6HRV9 | Pc13g07290 protein. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.999 |
Pc13g07290 | pxr2 | B6H3S8 | B6H063 | Pc13g07290 protein. | Aristolochene synthase prx2; Aristolochene synthase; part of the gene cluster that mediates the biosynthesis of PR-toxin, a bicyclic sesquiterpene belonging to the eremophilane class and acting as a mycotoxin. The first step of the pathway is catalyzed by the aristolochene synthase which performs the cyclization of trans,trans- farnesyl diphosphate (FPP) to the bicyclic sesquiterpene aristolochene. Following the formation of aristolochene, the non- oxygenated aristolochene is converted to the trioxygenated intermediate eremofortin B. This conversion appears to involve three enzymes, a [...] | 0.847 |
Pc13g12220 | Pc13g07290 | B6H591 | B6H3S8 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc13g07290 protein. | 0.931 |
Pc13g12220 | Pc16g00980 | B6H591 | B6H6Z1 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc16g00980 protein. | 0.935 |
Pc13g12220 | Pc20g01860 | B6H591 | B6HE19 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc20g01860 protein; Belongs to the FPP/GGPP synthase family. | 0.904 |
Pc13g12220 | Pc20g07830 | B6H591 | B6HEL5 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc20g07830 protein; Belongs to the FPP/GGPP synthase family. | 0.929 |
Pc13g12220 | Pc21g13930 | B6H591 | B6HNR8 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc21g13930 protein. | 0.898 |
Pc13g12220 | Pc21g15240 | B6H591 | B6HJG5 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc21g15240 protein; Belongs to the FPP/GGPP synthase family. | 0.950 |
Pc13g12220 | Pc22g05810 | B6H591 | B6HV70 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Pc22g05810 protein. | 0.945 |
Pc13g12220 | Pc22g12410 | B6H591 | B6HRV9 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding. | 0.924 |
Pc13g12220 | Pc22g18320 | B6H591 | B6HU67 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family. | 0.970 |
Pc13g12220 | pxr2 | B6H591 | B6H063 | Pc13g12220 protein; Belongs to the FPP/GGPP synthase family. | Aristolochene synthase prx2; Aristolochene synthase; part of the gene cluster that mediates the biosynthesis of PR-toxin, a bicyclic sesquiterpene belonging to the eremophilane class and acting as a mycotoxin. The first step of the pathway is catalyzed by the aristolochene synthase which performs the cyclization of trans,trans- farnesyl diphosphate (FPP) to the bicyclic sesquiterpene aristolochene. Following the formation of aristolochene, the non- oxygenated aristolochene is converted to the trioxygenated intermediate eremofortin B. This conversion appears to involve three enzymes, a [...] | 0.800 |
Pc16g00980 | Pc13g07290 | B6H6Z1 | B6H3S8 | Pc16g00980 protein. | Pc13g07290 protein. | 0.928 |
page 1 of 6