STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJC65364.1Shikimate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)    
Predicted Functional Partners:
KJC65363.1
3-dehydroquinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
KJC65837.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
KJC65365.1
Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KJC65562.1
3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
KJC65361.1
3-dehydroquinate dehydratase; Catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.966
KJC62870.1
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.868
KJC63309.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.849
KJC63521.1
Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.758
KJC64958.1
Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.738
KJC65838.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
Your Current Organism:
Agreia bicolorata
NCBI taxonomy Id: 110935
Other names: A. bicolorata, Agreia bicolorata Evtushenko et al. 2001 emend. Nouioui et al. 2018, Agrevia bicolorata, DSM 14575, JCM 12206, NBRC 103053, UCM Ac-620
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