STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJC64902.1Isopentenyl-diphosphate delta-isomerase; Catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)    
Predicted Functional Partners:
KJC64903.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.966
KJC63182.1
Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.965
KJC65676.1
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.961
KJC65267.1
Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.949
KJC65268.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.933
KJC63725.1
Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.905
KJC65683.1
UDP pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.889
ubiA
UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.871
KJC64904.1
C50 carotenoid epsilon cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.817
KJC64905.1
Lycopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.774
Your Current Organism:
Agreia bicolorata
NCBI taxonomy Id: 110935
Other names: A. bicolorata, Agreia bicolorata Evtushenko et al. 2001 emend. Nouioui et al. 2018, Agrevia bicolorata, DSM 14575, JCM 12206, NBRC 103053, UCM Ac-620
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