STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJC64187.1Ribulose 5-phosphate epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
KJC64019.1
Arabinose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
KJC64018.1
Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
KJC64020.1
Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.924
KJC65834.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.885
KJC65674.1
Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.817
KJC64809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.808
KJC64770.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.806
KJC64687.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.800
KJC65289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.788
KJC64252.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.694
Your Current Organism:
Agreia bicolorata
NCBI taxonomy Id: 110935
Other names: A. bicolorata, Agreia bicolorata Evtushenko et al. 2001 emend. Nouioui et al. 2018, Agrevia bicolorata, DSM 14575, JCM 12206, NBRC 103053, UCM Ac-620
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.