STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPR15510.1Serine/threonine kinase. (288 aa)    
Predicted Functional Partners:
CPR15513.1
Hypothetical protein.
  
    0.660
CPR15511.1
Serine/threonine kinase.
 
    
0.640
CPR15508.1
Serine/threonine kinase.
 
    
0.639
CPR19487.1
Alfa-L-rhamnosidase.
  
   0.534
CPR15507.1
Serine/threonine kinase.
 
    
0.532
CPR15514.1
AsnC family transcriptional regulator; Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.
       0.468
CPR15505.1
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.
      
0.444
CPR16129.1
MmgE/PrpD.
  
     0.436
CPR13971.1
FIG00883088: hypothetical protein.
  
     0.419
CPR16128.1
Immune-responsive protein 1.
  
     0.413
Your Current Organism:
Brenneria goodwinii
NCBI taxonomy Id: 1109412
Other names: B. goodwinii, BCC 845, Brenneria goodwinii Denman et al. 2012, Brenneria sp. LMG 26270, Brenneria sp. LMG 26271, Brenneria sp. LMG 26272, Brenneria sp. R-43476, Brenneria sp. R-43477, Brenneria sp. R-43479, Brenneria sp. R-43654, Brenneria sp. R-43655, Brenneria sp. R-43657, FRB 141, LMG 26270, LMG:26270, NCPPB 4484, strain R-43656
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