STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPR19635.1Sensory box histidine kinase/response regulator. (1274 aa)    
Predicted Functional Partners:
CPR14877.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 0.998
CPR19636.1
Response regulator, two-component system.
 
 
0.992
CPR17803.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
0.991
CPR14807.1
Aerobic respiration control sensor protein arcB.
 
 
0.990
CPR20473.1
Sensory box/GGDEF family protein.
 
 0.990
CPR21166.1
Chemotaxis protein CheV.
  
 
 0.990
CPR17398.1
BarA sensory histidine kinase (= VarS = GacS).
 
 
0.989
CPR19638.1
Aerotaxis sensor receptor protein.
  
 
0.988
CPR20561.1
Probable two-component sensor, near polyamine transporter.
 
 
 0.987
CPR19929.1
Putative signaling protein.
 
 0.986
Your Current Organism:
Brenneria goodwinii
NCBI taxonomy Id: 1109412
Other names: B. goodwinii, BCC 845, Brenneria goodwinii Denman et al. 2012, Brenneria sp. LMG 26270, Brenneria sp. LMG 26271, Brenneria sp. LMG 26272, Brenneria sp. R-43476, Brenneria sp. R-43477, Brenneria sp. R-43479, Brenneria sp. R-43654, Brenneria sp. R-43655, Brenneria sp. R-43657, FRB 141, LMG 26270, LMG:26270, NCPPB 4484, strain R-43656
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