STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00085Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (334 aa)    
Predicted Functional Partners:
PIIN_00958
Ribosomal_L28e domain-containing protein.
  
   0.701
PIIN_06387
Probable RPL14B-ribosomal protein.
   
 
 0.667
PIIN_04534
Probable 60S large subunit ribosomal protein L6.
   
 
 0.639
PIIN_08498
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 
 0.629
PIIN_02426
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
   0.628
PIIN_08860
Probable 40s ribosomal protein S13.e; Belongs to the universal ribosomal protein uS15 family.
   
   0.624
PIIN_06139
Probable 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.620
PIIN_09249
Probable RPL2A-ribosomal protein L8.e.
   
 
 0.620
PIIN_09135
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
   0.619
PIIN_01772
Probable 60s ribosomal protein L21-A.
   
   0.618
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.