STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00109Uncharacterized protein. (841 aa)    
Predicted Functional Partners:
PIIN_09737
Related to YPT-1 GTP-binding protein ypt1.
   
 0.996
PIIN_08518
Probable syntaxin, vesicular transport protein.
    
 0.991
PIIN_02516
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.989
PIIN_01572
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.985
PIIN_09878
Related to transport protein BET1-Laccaria bicolor.
    
 0.976
PIIN_07298
Related to Bet1-like protein-Laccaria bicolor.
    
 0.963
PIIN_09718
Related to SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.938
PIIN_01657
Related to GRH1-Yeast (GR)ASP65 (H)omologue.
   
 0.926
PIIN_01914
Related to YKT6-SNARE protein for Endoplasmic Reticulum-Golgi transport; Belongs to the synaptobrevin family.
   
 0.893
PIIN_02205
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.879
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.