STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00235Probable enzyme activator VAC14. (1719 aa)    
Predicted Functional Partners:
PIIN_08136
Related to FIG4-polyphosphoinositide phosphatase family member.
    
 0.987
PIIN_00006
PIPK domain-containing protein.
    
 0.962
PIIN_02597
Probable FAB1-phosphatidylinositol 3-phosphate 5-kinase.
    
 0.962
PIIN_01147
annotation not available
    
 0.929
PIIN_00046
Probable RAD54-DNA-dependent ATPase of the Snf2p family.
 
  
   0.903
PIIN_02832
Related to ATG18-Phosphatidylinositol 3,5-bisphosphate-binding protein.
    
 
 0.781
PIIN_01037
Related to RDH54-protein required for mitotic diploid-specific recombination and repair and meiosis.
 
  
   0.615
PIIN_00944
Related to DNA polymerase eta.
      
 0.547
PIIN_03800
Probable TYS1-tyrosyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.545
PIIN_09511
Related to Tyrosyl-tRNA synthetase.
      
 0.545
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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