STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00449Related to translation initiation factor 4e; Belongs to the eukaryotic initiation factor 4E family. (257 aa)    
Predicted Functional Partners:
PIIN_08383
Related to GYF domain protein-Aspergillus flavus NRRL3357.
    
 
 0.822
PIIN_00517
Related to translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family.
     
0.798
PIIN_00118
MI domain-containing protein.
    
 0.702
PIIN_04009
Related to translation initiation factor eIF-4F.
    
 0.702
PIIN_01700
GYF domain-containing protein.
    
 
 0.668
PIIN_01978
Related to YVC1-vacuolar cation channel.
    
 
 0.668
PIIN_00056
RBR-type E3 ubiquitin transferase.
    
 0.656
PIIN_05143
RBR-type E3 ubiquitin transferase.
    
 0.656
PIIN_11690
RBR-type E3 ubiquitin transferase.
    
 0.656
PIIN_00788
RING-type domain-containing protein.
     
 0.609
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.