STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00610Related to BZZ1-Myo3/5p-Bee1p-Vrp1p actin assembly complex component. (716 aa)    
Predicted Functional Partners:
PIIN_05140
Related to Neural Wiskott-Aldrich syndrome protein.
   
 0.986
PIIN_02061
Uncharacterized protein.
   
 0.979
PIIN_00323
Uncharacterized protein.
    
 0.862
PIIN_01667
Uncharacterized protein.
    
 0.837
PIIN_01670
Related to Rac1 GTP binding protein.
    
 0.837
PIIN_02147
Related to GTP binding protein Cdc42.
    
 0.837
PIIN_08257
Uncharacterized protein.
    
 0.837
PIIN_08843
Related to Orc3p.
    
 
 0.836
PIIN_05448
WH2 domain-containing protein.
    
 0.771
PIIN_06206
Uncharacterized protein.
    
 0.769
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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