STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_00783Probable GTPase activating protein. (792 aa)    
Predicted Functional Partners:
PIIN_03293
Probable GTPase Rab7 protein.
   
 0.987
PIIN_04148
Autophagy-related protein.
   
 0.984
PIIN_03489
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.900
PIIN_04110
Probable GTPase Rab7 protein.
    
 0.839
PIIN_09737
Related to YPT-1 GTP-binding protein ypt1.
 
   
 0.808
PIIN_01477
Related to NCA2-control of mitochondrial synthesis of Atp6p and Atp8p.
    
 0.702
PIIN_07859
Probable SEC4-like Rab/GTPase.
 
  
 0.702
PIIN_02958
Related to GTP-binding protein.
    
 0.681
PIIN_04053
Probable MDR1-Mac1p interacting protein.
      
 0.499
PIIN_06520
Rab-GAP TBC domain-containing protein.
   
  
 0.492
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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