STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01098Related to SNF8-protein involved in glucose derepression. (258 aa)    
Predicted Functional Partners:
PIIN_00186
GLUE N-terminal domain-containing protein.
   
 0.999
PIIN_04052
Uncharacterized protein.
   
 0.999
PIIN_03046
Related to VPS20-Vaculolar protein sorting (Putative).
    
 0.988
PIIN_03056
Fungal_trans domain-containing protein.
    
 0.965
PIIN_05725
Related to SNF7 protein.
    
 0.957
PIIN_00290
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.953
PIIN_00567
Uncharacterized protein.
    
 0.913
PIIN_02700
Related to DID4-class E vacuolar-protein sorting and endocytosis factor.
   
 0.909
PIIN_07904
Related to VPS24-endosomal Vps protein complex subunit.
    
 0.890
PIIN_06462
VPS37 C-terminal domain-containing protein.
     
 0.865
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.