STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01069WD_REPEATS_REGION domain-containing protein. (471 aa)    
Predicted Functional Partners:
PIIN_01483
CPSF_A domain-containing protein.
    
 0.999
PIIN_02455
Related to cullin 4A; Belongs to the cullin family.
    
 0.996
PIIN_09173
Probable ring-box protein 1.
    
 0.990
PIIN_01285
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.984
PIIN_06199
Related to sepB protein.
   
  
 0.907
PIIN_02879
AAA domain-containing protein.
   
  
 0.902
PIIN_06722
Related to EXO1-exonuclease which interacts with Msh2p.
   
 
 0.859
PIIN_01725
Zf-primase domain-containing protein.
   
  
 0.845
PIIN_05963
Probable COP9 signalosome subunit 5 CSN5.
    
 0.838
PIIN_00350
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
  
 0.831
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.