STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01279Uncharacterized protein. (137 aa)    
Predicted Functional Partners:
PIIN_02793
Related to COQ1-hexaprenyl pyrophosphate synthetase.
    
 0.806
PIIN_06589
Related to farnesyl-diphosphate farnesyltransferase.
     
 0.789
PIIN_09301
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.788
PIIN_02377
Related to ERG20-Farnesyl-pyrophosphate synthetase; Belongs to the CGI121/TPRKB family.
    
 0.786
PIIN_03771
Probable farnesyltranstransferase (Al-3); Belongs to the FPP/GGPP synthase family.
    
 0.741
NIP1
Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
 
      0.602
PIIN_03311
Related to Cleavage and polyadenylation specificity factor.
 
      0.494
PIIN_10559
Uncharacterized protein.
     
 0.475
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.