STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01310CRAL-TRIO domain-containing protein. (288 aa)    
Predicted Functional Partners:
PIIN_08700
Probable SEC14-phosphatidylinositol(PI)/phosphatidylcholine(PC) transfer protein.
    
 
0.715
PIIN_00721
Uncharacterized protein.
    
 0.686
PIIN_02621
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.651
PIIN_05589
AP-1 complex subunit gamma.
    
 0.645
PIIN_06409
Adaptin_N domain-containing protein.
    
 0.645
PIIN_00854
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.644
PIIN_04050
Probable diacylglycerol acyltransferase type 2b.
     
 0.640
PIIN_02578
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.636
PIIN_11672
Uncharacterized protein.
    
  0.633
PIIN_07446
Related to a retinal short-chain dehydrogenase/reductase.
    
  0.633
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.