STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01441Related to syntaxin 12; Belongs to the syntaxin family. (277 aa)    
Predicted Functional Partners:
PIIN_07899
Related to VTI1-v-SNARE: involved in Golgi retrograde protein traffic.
   
 0.995
PIIN_01914
Related to YKT6-SNARE protein for Endoplasmic Reticulum-Golgi transport; Belongs to the synaptobrevin family.
   
 0.993
PIIN_06578
t-SNARE coiled-coil homology domain-containing protein.
    
 0.993
PIIN_02226
Probable synaptobrevin (V-SNARE) homolog.
   
 0.990
PIIN_01300
Related to SEC9-protein transport protein.
   
 0.989
PIIN_04404
Probable SEC22-synaptobrevin (V-SNARE); Belongs to the synaptobrevin family.
    
 0.988
PIIN_01139
Probable SEC17-transport vesicle fusion protein.
    
 0.987
PIIN_02224
Related to vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
   
 0.987
PIIN_00978
Probable vacuolar sorting protein (HbrA); Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.975
PIIN_04294
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.973
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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