STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01592Related to human transcription regulator Staf-5. (645 aa)    
Predicted Functional Partners:
PIIN_02477
Related to 1-acyldihydroxyacetone-phosphate reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.672
PIIN_02920
Related to RAD52-recombination and DNA repair protein.
    
 
 0.504
PIIN_03922
Related to dienelactone hydrolase endo-1,3,1,4-beta-D-glucanase-Laccaria bicolor.
     
 0.474
PIIN_04462
Related to dienelactone hydrolase endo-1,3,1,4-beta-D-glucanase-Laccaria bicolor.
     
 0.474
PIIN_04463
Related to dienelactone hydrolase endo-1,3,1,4-beta-D-glucanase-Laccaria bicolor.
     
 0.474
PIIN_07557
DLH domain-containing protein.
     
 0.474
PIIN_09216
Probable Ubiquitin conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.435
PIIN_03556
3'-5' exonuclease domain-containing protein.
    
 
 0.427
PIIN_03778
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 
 0.427
PIIN_06323
Related to QDE-3 QDE3 protein (Involved in gene silencing).
    
 
 0.427
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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