STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01653Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
PIIN_08418
Related to Slh1p interacting factor.
   
 
 0.726
PIIN_09384
Protein YIP.
    
 
 0.617
PIIN_01922
Uncharacterized protein.
    
 
 0.582
PIIN_10503
Uncharacterized protein.
    
 
 0.561
PIIN_09737
Related to YPT-1 GTP-binding protein ypt1.
   
 
 0.545
PIIN_11905
Related to translation initiation factor 3 (47 kDa subunit); Belongs to the eIF-3 subunit F family.
    
  0.444
PIIN_03315
Uncharacterized protein.
    
 
 0.443
PIIN_03674
Related to SSH4-suppressor of SHR3.
    
 
 0.443
PIIN_00073
Related to endonuclease/exonuclease/phosphatase family protein-Neosartorya fischeri.
 
      0.410
PIIN_02704
annotation not available
    
 
 0.402
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.