STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01916rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (382 aa)    
Predicted Functional Partners:
PIIN_06255
Related to RPO41-DNA-directed RNA polymerase, mitochondrial.
   
 0.991
PIIN_05178
Related to ENP1-required for pre-rRNA processing and 40S ribosomal subunit synthesis.
   
 
 0.979
PIIN_00010
Probable IMP4-component of the U3 small nucleolar ribonucleoprotein.
   
   0.933
PIIN_04537
Related to DIP2-Dom34p-interacting protein.
   
   0.914
PIIN_03596
Related to S. pombe beta-transducin.
   
   0.904
PIIN_01213
U3 small nucleolar RNA-associated protein 22.
   
   0.903
PIIN_01654
Related to SAS10-involved in silencing.
   
   0.898
PIIN_01163
Related to NOC4-ribosome biogenesis protein.
   
   0.897
PIIN_05941
Related to MRPS9-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.895
PIIN_00452
Probable ribosomal protein S12, cytosolic; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.893
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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