STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_01995Uncharacterized protein. (312 aa)    
Predicted Functional Partners:
PIIN_01990
Probable alcohol dehydrogenase.
  
 0.855
PIIN_00796
MADS-box domain-containing protein.
    
 0.790
PIIN_08508
Acetolactate synthase.
   
 
 0.607
PIIN_01056
Zn(2)-C6 fungal-type domain-containing protein.
  
 0.592
PIIN_03999
Related to formaldehyde dehydrogenase.
  
 0.592
PIIN_05646
Probable xylitol dehydrogenase.
  
 0.592
PIIN_05868
Related to sorbitol dehydrogenase.
  
 0.592
PIIN_01323
Threonine dehydratase.
   
 
  0.567
PIIN_03783
Related to Ceramide glucosyltransferase.
   
 
  0.567
PIIN_05914
Related to L-serine dehydratase.
   
 
  0.567
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.