STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02081Probable het-c2 protein. (218 aa)    
Predicted Functional Partners:
PIIN_05146
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
 
      0.717
PIIN_01146
Related to small GTP-binding protein-Korarchaeum cryptofilum.
   
 0.687
PIIN_02017
Probable ADP-ribosylation factor.
   
 0.672
PIIN_02018
Probable ADP-ribosylation factor.
   
 0.672
PIIN_02927
Probable ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.672
PIIN_08881
Probable ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.672
PIIN_08883
Probable ADP-ribosylation factor.
   
 0.672
PIIN_08882
Probable ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
   
 0.670
PIIN_00068
Probable ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.659
PIIN_03405
Probable ARL1-ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.640
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.