STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02147Related to GTP binding protein Cdc42. (139 aa)    
Predicted Functional Partners:
PIIN_07969
Related to Protein scd2/ral3.
   
 0.992
PIIN_11679
Uncharacterized protein.
    
 0.991
PIIN_00178
Non-specific serine/threonine protein kinase.
    
 0.978
PIIN_05101
Non-specific serine/threonine protein kinase.
    
 0.978
PIIN_02061
Uncharacterized protein.
    
 0.966
PIIN_02063
Probable rho GDP dissociation inhibitor.
   
 0.962
PIIN_07223
Related to BEM3-GTPase-activating protein.
    
 0.956
PIIN_02990
DH domain-containing protein.
    
 0.940
PIIN_01347
DH domain-containing protein.
    
 0.934
PIIN_02576
Uncharacterized protein.
    
 0.934
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.