STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02170Extracellular metalloproteinase; Belongs to the peptidase M36 family. (976 aa)    
Predicted Functional Partners:
PIIN_01760
Probable COX4-cytochrome-c oxidase chain IV.
   
 0.671
PIIN_mito_COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.662
PIIN_mito_COX3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.661
PIIN_04367
Probable cytochrome-c oxidase chain VI.
   
 0.648
PIIN_08737
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.646
PIIN_00881
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.637
PIIN_03390
Uncharacterized protein.
   
 0.637
PIIN_07436
Related to CYS-3 regulatory protein cys-3.
   
 0.637
PIIN_10262
Probable cytochrome-c oxidase chain V.
    
 0.621
PIIN_00146
Related to endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.503
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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