STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02213Uncharacterized protein. (581 aa)    
Predicted Functional Partners:
PIIN_07311
Uncharacterized protein.
    
 0.986
PIIN_06011
Uncharacterized protein.
     
 0.983
PIIN_01728
Probable SONA.
   
 0.980
PIIN_03264
Probable DBP5-ATP-dependent RNA helicase of the DEAD-box family involved in mRNA export; Belongs to the DEAD box helicase family.
    
 
 0.972
PIIN_05209
Related to NUP170-nuclear pore protein.
   
 0.971
PIIN_06102
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.958
PIIN_06351
Nsp1_C domain-containing protein.
    
 0.953
PIIN_03575
Nup54 domain-containing protein.
   
 0.949
PIIN_01203
Uncharacterized protein.
   
 0.942
PIIN_06723
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.924
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.