STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02257Related to F-box/WD-repeat protein. (635 aa)    
Predicted Functional Partners:
PIIN_09173
Probable ring-box protein 1.
    
 0.987
PIIN_01643
Probable SCF complex member Cullin 1; Belongs to the cullin family.
   
 0.968
PIIN_07301
Related to Cullin-3; Belongs to the cullin family.
   
 0.968
PIIN_00767
Probable glycogen synthase kinase 3 alpha; Belongs to the protein kinase superfamily.
    
 0.949
PIIN_06476
Probable ubiquitin-like protein ubl1.
    
 0.935
PIIN_09216
Probable Ubiquitin conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.929
PIIN_03601
Probable negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 0.924
PIIN_03604
Probable negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 0.924
PIIN_03606
Related to SKP1-Kinetochore protein complex CBF3, subunit D; Belongs to the SKP1 family.
    
 0.924
PIIN_03600
Probable negative regulator sulfur controller-3; Belongs to the SKP1 family.
    
 0.924
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.