STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02297Related to ubiquitin-activating enzyme. (429 aa)    
Predicted Functional Partners:
PIIN_05142
Related to auxin-resistance protein.
   
 0.999
PIIN_06476
Probable ubiquitin-like protein ubl1.
   
 0.999
PIIN_06442
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.989
PIIN_07554
Related to rat ubiquitin ligase Nedd4.
    
 0.989
PIIN_07085
Probable UBA1-ubiquitin-protein ligase, E1-like (Ubiquitin-activating) enzyme.
    
0.987
PIIN_07621
Probable Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.986
PIIN_10579
Uncharacterized protein.
   
 0.979
PIIN_05007
Related to JHD1-JmjC domain family histone demethylase specific for H3-K36.
    
 0.977
PIIN_02161
Tyrosine--tRNA ligase.
 
    
 0.900
PIIN_04148
Autophagy-related protein.
   
 0.892
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.