STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02349Related to sulphate transporter proteins. (652 aa)    
Predicted Functional Partners:
PIIN_09737
Related to YPT-1 GTP-binding protein ypt1.
   
 
 0.789
PIIN_06586
Uncharacterized protein; Belongs to the complex I LYR family.
    
 
 0.746
PIIN_mito_NAD4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
  
 
 0.698
PIIN_07813
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
   0.664
PIIN_02567
Related to chloride-bicarbonate anion exchanger AE2.
     
 0.647
PIIN_00412
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.630
PIIN_01353
Uncharacterized protein.
    
   0.624
PIIN_01352
Uncharacterized protein.
    
   0.624
PIIN_02477
Related to 1-acyldihydroxyacetone-phosphate reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.621
PIIN_00859
Glutamine synthetase.
   
 
 0.586
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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