STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02368CID domain-containing protein. (307 aa)    
Predicted Functional Partners:
PIIN_01059
Related to CTK1-carboxy-terminal domain (CTD) kinase, alpha subunit.
    
 
 0.972
PIIN_01774
Protein kinase domain-containing protein.
    
 
 0.897
PIIN_01093
CYCLIN domain-containing protein; Belongs to the cyclin family.
   
 
 0.850
PIIN_01493
Uncharacterized protein; Belongs to the cyclin family.
   
 
 0.844
PIIN_01865
Related to cyclin dependent kinase C.
    
 
 0.799
PIIN_11493
Uncharacterized protein.
    
 
 0.799
PIIN_01511
Uncharacterized protein.
    
 
 0.716
PIIN_07024
Related to anon-37cs protein.
    
 
 0.716
PIIN_00069
BZIP domain-containing protein.
    
  0.600
PIIN_07129
Related to YRA1-RNA annealing protein.
   
   0.570
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.