STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02544Related to 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (332 aa)    
Predicted Functional Partners:
PIIN_05583
Probable AGX1-alanine-glyoxylate transaminase.
  
 
 0.883
PIIN_00314
Probable malate synthase, glyoxisomal.
   
 
 0.856
PIIN_04896
Tryptophan synthase.
  
 
 0.853
PIIN_09510
Probable RPL17A-ribosomal protein L17.e; Belongs to the universal ribosomal protein uL22 family.
 
      0.852
PIIN_01625
Isocitrate lyase.
  
 0.833
PIIN_02117
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.831
PIIN_03361
Related to glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
  
 
0.824
PIIN_02841
Isocitrate lyase.
  
 
 0.821
PIIN_03714
Related to dihydrodipicolinate synthetase.
   
 0.819
PIIN_00488
WGS project CAFZ00000000 data, contig PIRI_contig_0006.
 
 
 
 0.808
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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