STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02584Related to l-azetidine-2-carboxylic acid acetyltransferase. (241 aa)    
Predicted Functional Partners:
PIIN_07798
Related to septum formation maf.
    
 0.900
PIIN_02936
Probable delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.851
PIIN_02641
Arginase; Belongs to the arginase family.
  
 
 0.801
PIIN_03137
Probable ARG4-arginosuccinate lyase.
     
 0.799
PIIN_11721
Ornithine aminotransferase.
     
 0.790
PIIN_00795
Glutamine amidotransferase type-2 domain-containing protein.
  
 0.688
PIIN_05499
Probable GFA1-glucosamine--fructose-6-phosphate transaminase.
  
 0.688
PIIN_09284
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
   
 
 0.680
PIIN_08209
Related to ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.646
PIIN_02363
Uncharacterized protein.
   
 
 0.610
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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