STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02553Cytochrome b561 domain-containing protein. (415 aa)    
Predicted Functional Partners:
PIIN_01312
Uncharacterized protein.
   
 
 0.773
PIIN_02776
Related to MRPL17-mitochondrial ribosomal protein, large subunit.
   
   0.766
PIIN_05350
Related to MRPL9-mitochondrial ribosomal protein, large subunit; Belongs to the universal ribosomal protein uL3 family.
   
   0.766
PIIN_01827
Uncharacterized protein.
   
 
 0.730
PIIN_07126
MRP-S28 domain-containing protein.
   
   0.728
PIIN_01364
Related to MRPS28-mitochondrial ribosomal protein, small subunit.
   
   0.724
PIIN_03605
Related to MRP7-mitochondrial ribosomal protein, large subunit.
   
 
 0.724
PIIN_11773
Uncharacterized protein.
   
 
 0.720
PIIN_02427
Related to 50S ribosomal protein L4.
   
 
 0.720
PIIN_01974
Related to 50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.716
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.