STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02609Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
PIIN_03616
Related to Ribonuclease P protein subunit p30.
    
 0.921
PIIN_09202
Ribonuclease P protein subunit.
    
 0.920
PIIN_02501
Uncharacterized protein.
   
 0.908
PIIN_02255
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.902
PIIN_01645
Uncharacterized protein.
    
 0.885
PIIN_06663
Probable RPL8B-60s large subunit ribosomal protein L7a.e.B.
   
 0.679
PIIN_05498
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 0.678
PIIN_08877
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.678
PIIN_04078
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
 
 0.650
PIIN_03638
Probable 40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
     
 0.642
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.