STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02669Uncharacterized protein. (1466 aa)    
Predicted Functional Partners:
PIIN_00261
Related to argonaute-like protein-Laccaria bicolor; Belongs to the argonaute family.
   
 0.948
PIIN_03690
Related to QDE-2 post-transcriptional gene silencing protein QDE-2; Belongs to the argonaute family.
   
 0.948
PIIN_05928
Related to QDE-2 post-transcriptional gene silencing protein QDE-2.
   
 0.872
PIIN_00081
Piwi domain-containing protein.
   
 0.866
PIIN_06945
Related to qde-1 RNA-dependent RNA polymerase (RdRP).
   
 
 0.796
PIIN_07582
RNA-dependent RNA polymerase.
   
 
 0.796
PIIN_01633
RIC1 domain-containing protein.
   
 0.729
PIIN_03605
Related to MRP7-mitochondrial ribosomal protein, large subunit.
  
 
 0.728
PIIN_05941
Related to MRPS9-mitochondrial ribosomal protein, small subunit; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.714
PIIN_01766
Related to mitochondrial ribosomal protein YmL8; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.703
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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