STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02745Related to curved dna-binding protein. (402 aa)    
Predicted Functional Partners:
PIIN_04295
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.995
PIIN_07179
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.994
PIIN_08083
Probable RPL5-60S large subunit ribosomal protein L5.e.
  
 
 0.994
PIIN_09589
Probable RPL25-ribosomal protein L23a.e; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.994
PIIN_01408
Probable ribosomal protein L35.
  
 
 0.993
PIIN_07581
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.992
PIIN_02612
Related to WD-repeat protein crb3.
   
 
 0.990
PIIN_11802
Related to pescadillo development protein.
   
 
 0.990
PIIN_04149
Related to protein RPF2 involved in ribosomal large subunit assembly and maintenance.
   
 
 0.988
PIIN_07174
Probable NSA2-involved in biogenesis of ribosomal large subunit.
   
 
 0.988
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.