STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02752Glucanase; Belongs to the glycosyl hydrolase family 6. (472 aa)    
Predicted Functional Partners:
PIIN_03577
Probable beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
 
 0.887
PIIN_01190
Probable cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
 
 
 0.833
PIIN_01192
Probable cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 
0.833
PIIN_02711
Related to beta-glucosidase.
 
  
 0.799
PIIN_05524
MINDY_DUB domain-containing protein.
     
 0.798
PIIN_00353
Glucanase; Belongs to the glycosyl hydrolase family 6.
  
  
 
0.797
PIIN_08933
Endoglucanase.
   
 
  0.793
PIIN_00177
Related to SET domain-containing protein-Laccaria bicolor.
     
 0.791
PIIN_06594
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
  
  
0.772
PIIN_00392
Related to beta-glucosidase.
    
 0.771
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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