STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02793Related to COQ1-hexaprenyl pyrophosphate synthetase. (525 aa)    
Predicted Functional Partners:
PIIN_01434
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 0.935
PIIN_04896
Tryptophan synthase.
    
 0.930
PIIN_06589
Related to farnesyl-diphosphate farnesyltransferase.
  
 0.925
PIIN_02377
Related to ERG20-Farnesyl-pyrophosphate synthetase; Belongs to the CGI121/TPRKB family.
    
 0.921
PIIN_03000
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.910
PIIN_05150
Probable 26S proteasome non-ATPase regulatory subunit p58.
 
      0.899
PIIN_06235
Probable isopentenyl-diphosphate delta-isomerase.
  
 
 0.890
PIIN_01862
Related to L-lactate dehydrogenase (Cytochrome b2).
  
 
 0.877
PIIN_04410
Related to L-lactate dehydrogenase (Cytochrome b2).
  
 
 0.877
PIIN_06209
Probable CYB2-L-lactate dehydrogenase (Cytochrome b2); Belongs to the cytochrome b5 family.
  
 
 0.877
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.