STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_02825Uncharacterized protein. (574 aa)    
Predicted Functional Partners:
PIIN_04051
Probable CDC48-Microsomal protein of CDC48/PAS1/SEC18 family of ATPases; Belongs to the AAA ATPase family.
    
 
 0.970
PIIN_02154
FK506-binding protein.
    
 
 0.902
PIIN_03231
Probable QRI8-E2 ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.852
PIIN_01012
Related to HRD1-involved in degradation of Hmg2p.
    
 
 0.848
PIIN_04750
Related to AFG2-ATPase of the CDC48/PAS1/SEC18 (AAA) family.
    
 
 0.844
PIIN_04327
Related to CDC36-transcription factor.
    
 
 0.841
PIIN_06982
CUE domain-containing protein.
    
 
 0.841
PIIN_01199
UBX domain-containing protein.
    
 
 0.832
PIIN_06153
Probable UBC6-E2 ubiquitin-conjugating enzyme.
    
 
 0.819
PIIN_02459
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.746
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
Server load: low (26%) [HD]