STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIIN_029423-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (767 aa)    
Predicted Functional Partners:
PIIN_02438
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 0.994
PIIN_05241
Probable LYS20-homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 
 0.981
PIIN_02315
Probable LEU4-2-isopropylmalalate synthase.
  
 
 0.975
PIIN_04776
Related to hydroxymethylglutaryl-CoA lyase.
  
 
 0.958
PIIN_08508
Acetolactate synthase.
  
 
 0.951
PIIN_06544
Related to ILV6-acetolactate synthase, regulatory subunit.
  
  
 0.943
PIIN_04239
Uncharacterized protein.
  
 0.942
PIIN_07281
Uncharacterized protein.
  
 0.942
PIIN_07291
Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family.
 
 
  
 0.917
PIIN_11906
Probable dihydroxy-acid dehydratase.
  
 
 0.905
Your Current Organism:
Serendipita indica
NCBI taxonomy Id: 1109443
Other names: Piriformospora indica DSM 11827, S. indica DSM 11827, Serendipita indica DSM 11827
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